Enhanced flowType/RchyOptimyx: a BioConductor pipeline for discovery in high-dimensional cytometry data.
Where this comes from
- Record sourced from PubMed, PMID 24407226.
- Also identified by DOI 10.1093/bioinformatics/btt770 and PMC identifier 3998128.
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Abstract
We present a significantly improved version of the flowType and RchyOptimyx BioConductor-based pipeline that is both 14 times faster and can accommodate multiple levels of biomarker expression for up to 96 markers. With these improvements, the pipeline is positioned to be an integral part of data analysis for high-throughput experiments on high-dimensional single-cell assay platforms, including flow cytometry, mass cytometry and single-cell RT-qPCR.
Medical subject headings
- Flow Cytometry