Functional annotation of noncoding sequence variants.

Ritchie, Graham R S; Dunham, Ian; Zeggini, Eleftheria; Flicek, Paul · Nat Methods · 2014

basic_science · Level V

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Abstract

Identifying functionally relevant variants against the background of ubiquitous genetic variation is a major challenge in human genetics. For variants in protein-coding regions, our understanding of the genetic code and splicing allows us to identify likely candidates, but interpreting variants outside genic regions is more difficult. Here we present genome-wide annotation of variants (GWAVA), a tool that supports prioritization of noncoding variants by integrating various genomic and epigenomic annotations.

Medical subject headings