The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology.
basic_science · Level V
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- Record sourced from PubMed, PMID 24911500.
- Also identified by DOI 10.1038/nbt.2891.
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Abstract
The re-use of previously validated designs is critical to the evolution of synthetic biology from a research discipline to an engineering practice. Here we describe the Synthetic Biology Open Language (SBOL), a proposed data standard for exchanging designs within the synthetic biology community. SBOL represents synthetic biology designs in a community-driven, formalized format for exchange between software tools, research groups and commercial service providers. The SBOL Developers Group has implemented SBOL as an XML/RDF serialization and provides software libraries and specification documentation to help developers implement SBOL in their own software. We describe early successes, including a demonstration of the utility of SBOL for information exchange between several different software tools and repositories from both academic and industrial partners. As a community-driven standard, SBOL will be updated as synthetic biology evolves to provide specific capabilities for different aspects of the synthetic biology workflow.
Medical subject headings
- Information Dissemination
- Research Design
- Software
- Synthetic Biology
- Terminology as Topic
- Vocabulary, Controlled