FungiFun2: a comprehensive online resource for systematic analysis of gene lists from fungal species.

Priebe, Steffen; Kreisel, Christian; Horn, Fabian; Guthke, Reinhard; Linde, Jörg · Bioinformatics · 2015

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Abstract

Systematically extracting biological meaning from omics data is a major challenge in systems biology. Enrichment analysis is often used to identify characteristic patterns in candidate lists. FungiFun is a user-friendly Web tool for functional enrichment analysis of fungal genes and proteins. The novel tool FungiFun2 uses a completely revised data management system and thus allows enrichment analysis for 298 currently available fungal strains published in standard databases. FungiFun2 offers a modern Web interface and creates interactive tables, charts and figures, which users can directly manipulate to their needs. FungiFun2, examples and tutorials are publicly available at https://elbe.hki-jena.de/fungifun/. steffen.priebe@hki-jena.de or joerg.linde@hki-jena.de.

Medical subject headings