LysargiNase mirrors trypsin for protein C-terminal and methylation-site identification.

Huesgen, Pitter F; Lange, Philipp F; Rogers, Lindsay D; Solis, Nestor; Eckhard, Ulrich; Kleifeld, Oded; Goulas, Theodoros; Gomis-Rüth, F Xavier et al. · Nat Methods · 2015

basic_science · Level V

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Abstract

To improve proteome coverage and protein C-terminal identification, we characterized the Methanosarcina acetivorans thermophilic proteinase LysargiNase, which cleaves before lysine and arginine up to 55 °C. Unlike trypsin, LysargiNase-generated peptides had N-terminal lysine or arginine residues and fragmented with b ion-dominated spectra. This improved protein C terminal-peptide identification and several arginine-rich phosphosite assignments. Notably, cleavage also occurred at methylated or dimethylated lysine and arginine, facilitating detection of these epigenetic modifications.

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