The GPMDB REST interface.
other · Level V
Where this comes from
- Record sourced from PubMed, PMID 25697819.
- Also identified by DOI 10.1093/bioinformatics/btv107.
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Abstract
The Global Proteome Machine and Database (GPMDB) representational state transfer (REST) service was designed to provide simplified access to the proteomics information in GPMDB using a stable set of methods and parameters. Version 1 of this interface gives access to 25 methods for retrieving experimental information about protein post-translational modifications, amino acid variants, alternate splicing variants and protein cleavage patterns. GPMDB data and database tables are freely available for commercial and non-commercial use. All software is also freely available, under the Artistic License. http://rest.thegpm.org/1 (GPMDB REST Service), http://wiki.thegpm.org/wiki/GPMDB_REST (Service description and help), and http://www.thegpm.org (GPM main project description and documentation). The code for the interface and an example REST client is available at ftp://ftp.thegpm.org/repos/gpmdb_rest
Medical subject headings
- Algorithms
- Computational Biology
- Databases, Factual
- Information Storage and Retrieval
- Protein Processing, Post-Translational
- Proteome
- Software