cyNeo4j: connecting Neo4j and Cytoscape.
other · Level V
Where this comes from
- Record sourced from PubMed, PMID 26272981.
- Also identified by DOI 10.1093/bioinformatics/btv460 and PMC identifier 4653389.
- Licence recorded as CC BY.
- The licence permits redistribution, so the abstract is shown in full and the full text is available from the publisher.
Abstract
We developed cyNeo4j, a Cytoscape App to link Cytoscape and Neo4j databases to utilize the performance and storage capacities Neo4j offers. We implemented a Neo4j NetworkAnalyzer, ForceAtlas2 layout and Cypher component to demonstrate the possibilities a distributed setup of Cytoscape and Neo4j have. The app is available from the Cytoscape App Store at http://apps.cytoscape.org/apps/cyneo4j, the Neo4j plugins at www.github.com/gsummer/cyneo4j-parent and the community and commercial editions of Neo4j can be found at http://www.neo4j.com. georg.summer@gmail.com.
Medical subject headings
- Databases, Factual
- Software