TreeQTL: hierarchical error control for eQTL findings.

Peterson, C B; Bogomolov, M; Benjamini, Y; Sabatti, C · Bioinformatics · 2016

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Abstract

: Commonly used multiplicity adjustments fail to control the error rate for reported findings in many expression quantitative trait loci (eQTL) studies. TreeQTL implements a hierarchical multiple testing procedure which allows control of appropriate error rates defined relative to a grouping of the eQTL hypotheses. The R package TreeQTL is available for download at http://bioinformatics.org/treeqtl sabatti@stanford.edu Supplementary data are available at Bioinformatics online.

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