GenVisR: Genomic Visualizations in R.

Skidmore, Zachary L; Wagner, Alex H; Lesurf, Robert; Campbell, Katie M; Kunisaki, Jason; Griffith, Obi L; Griffith, Malachi · Bioinformatics · 2016

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Abstract

Visualizing and summarizing data from genomic studies continues to be a challenge. Here, we introduce the GenVisR package to addresses this challenge by providing highly customizable, publication-quality graphics focused on cohort level genome analyses. GenVisR provides a rapid and easy-to-use suite of genomic visualization tools, while maintaining a high degree of flexibility by leveraging the abilities of ggplot2 and Bioconductor. GenVisR is an R package available via Bioconductor (https://bioconductor.org/packages/GenVisR) under GPLv3. Support is available via GitHub (https://github.com/griffithlab/GenVisR/issues) and the Bioconductor support website. obigriffith@wustl.edu or mgriffit@wustl.edu Supplementary data are available at Bioinformatics online.

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