Dynamics and mechanism of ultrafast water-protein interactions.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 27339138.
- Also identified by DOI 10.1073/pnas.1602916113 and PMC identifier 4968723.
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Abstract
Protein hydration is essential to its structure, dynamics, and function, but water-protein interactions have not been directly observed in real time at physiological temperature to our awareness. By using a tryptophan scan with femtosecond spectroscopy, we simultaneously measured the hydration water dynamics and protein side-chain motions with temperature dependence. We observed the heterogeneous hydration dynamics around the global protein surface with two types of coupled motions, collective water/side-chain reorientation in a few picoseconds and cooperative water/side-chain restructuring in tens of picoseconds. The ultrafast dynamics in hundreds of femtoseconds is from the outer-layer, bulk-type mobile water molecules in the hydration shell. We also found that the hydration water dynamics are always faster than protein side-chain relaxations but with the same energy barriers, indicating hydration shell fluctuations driving protein side-chain motions on the picosecond time scales and thus elucidating their ultimate relationship.
Medical subject headings
- Molecular Dynamics Simulation
- Proteins
- Temperature
- Water