Massively parallel single-nucleotide mutagenesis using reversibly terminated inosine.

Haller, Gabe; Alvarado, David; McCall, Kevin; Mitra, Robi D; Dobbs, Matthew B; Gurnett, Christina A · Nat Methods · 2016

basic_science · Level V

Where this comes from

Abstract

Large-scale mutagenesis of target DNA sequences allows researchers to comprehensively assess the effects of single-nucleotide changes. Here we demonstrate the construction of a systematic allelic series (SAS) using massively parallel single-nucleotide mutagenesis with reversibly terminated deoxyinosine triphosphates (rtITP). We created a mutational library containing every possible single-nucleotide mutation surrounding the active site of the TEM-1 β-lactamase gene. When combined with high-throughput functional assays, SAS mutational libraries can expedite the functional assessment of genetic variation.

Medical subject headings