The PPI3D web server for searching, analyzing and modeling protein-protein interactions in the context of 3D structures.

Dapkunas, Justas; Timinskas, Albertas; Olechnovic, Kliment; Margelevicius, Mindaugas; Diciunas, Rytis; Venclovas, Ceslovas · Bioinformatics · 2017

basic_science · Level V

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Abstract

The PPI3D web server is focused on searching and analyzing the structural data on protein-protein interactions. Reducing the data redundancy by clustering and analyzing the properties of interaction interfaces using Voronoi tessellation makes this software a highly effective tool for addressing different questions related to protein interactions. The server is freely accessible at http://bioinformatics.lt/software/ppi3d/ . ceslovas.venclovas@bti.vu.lt. Supplementary data are available at Bioinformatics online.

Medical subject headings