ANAQUIN: a software toolkit for the analysis of spike-in controls for next generation sequencing.
other · Level V
Where this comes from
- Record sourced from PubMed, PMID 28130232.
- Also identified by DOI 10.1093/bioinformatics/btx038.
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Abstract
Spike-in controls are synthetic nucleic-acid sequences that are added to a user's sample and constitute internal standards for subsequent steps in the next generation sequencing workflow. : The software is implemented in C ++/R and is freely available under BSD license. The source code is available from github.com/student-t/Anaquin , binaries and user manual from www.sequin.xyz/software and R package from bioconductor.org/packages/Anaquin. anaquin@garvan.org.au or t.mercer@garvan.org.au. Supplementary data are available at Bioinformatics online.
Medical subject headings
- High-Throughput Nucleotide Sequencing
- Sequence Analysis, DNA
- Sequence Analysis, RNA
- Software