Aozan: an automated post-sequencing data-processing pipeline.
other · Level V
Where this comes from
- Record sourced from PubMed, PMID 28369225.
- Also identified by DOI 10.1093/bioinformatics/btx154.
- No licence information is recorded for this record.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
Data management and quality control of output from Illumina sequencers is a disk space- and time-consuming task. Thus, we developed Aozan to automatically handle data transfer, demultiplexing, conversion and quality control once a run has finished. This software greatly improves run data management and the monitoring of run statistics via automatic emails and HTML web reports. Aozan is implemented in Java and Python, supported on Linux systems, and distributed under the GPLv3 License at: http://www.outils.genomique.biologie.ens.fr/aozan/ . Aozan source code is available on GitHub: https://github.com/GenomicParisCentre/aozan . aozan@biologie.ens.fr.
Medical subject headings
- Sequence Analysis, DNA
- Software