modlAMP: Python for antimicrobial peptides.
basic_science · Level V
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- Record sourced from PubMed, PMID 28472272.
- Also identified by DOI 10.1093/bioinformatics/btx285.
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Abstract
We have implemented the lecular esign aboratory's nti icrobial eptides package ( ), a Python-based software package for the design, classification and visual representation of peptide data. modlAMP offers functions for molecular descriptor calculation and the retrieval of amino acid sequences from public or local sequence databases, and provides instant access to precompiled datasets for machine learning. The package also contains methods for the analysis and representation of circular dichroism spectra. The modlAMP Python package is available under the BSD license from URL http://doi.org/10.5905/ethz-1007-72 or via pip from the Python Package Index (PyPI). gisbert.schneider@pharma.ethz.ch. Supplementary data are available at Bioinformatics online.
Medical subject headings
- Anti-Infective Agents
- Computational Biology
- Machine Learning
- Peptides
- Software