ComplexViewer: visualization of curated macromolecular complexes.
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- Record sourced from PubMed, PMID 29036573.
- Also identified by DOI 10.1093/bioinformatics/btx497 and PMC identifier 5870653.
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Abstract
Proteins frequently function as parts of complexes, assemblages of multiple proteins and other biomolecules, yet network visualizations usually only show proteins as parts of binary interactions. ComplexViewer visualizes interactions with more than two participants and thereby avoids the need to first expand these into multiple binary interactions. Furthermore, if binding regions between molecules are known then these can be displayed in the context of the larger complex. freely available under Apache version 2 license; EMBL-EBI Complex Portal: http://www.ebi.ac.uk/complexportal; Source code: https://github.com/MICommunity/ComplexViewer; Package: https://www.npmjs.com/package/complexviewer; http://biojs.io/d/complexviewer. Language: JavaScript; Web technology: Scalable Vector Graphics; Libraries: D3.js. colin.combe@ed.ac.uk or juri.rappsilber@ed.ac.uk.
Medical subject headings
- Computational Biology
- Models, Biological
- Protein Interaction Domains and Motifs
- Protein Interaction Maps
- Software