PyBEL: a computational framework for Biological Expression Language.
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- Record sourced from PubMed, PMID 29048466.
- Also identified by DOI 10.1093/bioinformatics/btx660 and PMC identifier 5860616.
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Abstract
Biological Expression Language (BEL) assembles knowledge networks from biological relations across multiple modes and scales. Here, we present PyBEL; a software package for parsing, validating, converting, storing, querying, and visualizing networks encoded in BEL. PyBEL is implemented in platform-independent, universal Python code. Its source is distributed under the Apache 2.0 License at https://github.com/pybel. charles.hoyt@scai.fraunhofer.de. Supplementary data are available at Bioinformatics online.
Medical subject headings
- Computational Biology
- Metabolic Networks and Pathways
- Models, Biological
- Signal Transduction
- Software