PESTO: Parameter EStimation TOolbox.
basic_science · Level V
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- Record sourced from PubMed, PMID 29069312.
- Also identified by DOI 10.1093/bioinformatics/btx676 and PMC identifier 5860618.
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Abstract
PESTO is a widely applicable and highly customizable toolbox for parameter estimation in MathWorks MATLAB. It offers scalable algorithms for optimization, uncertainty and identifiability analysis, which work in a very generic manner, treating the objective function as a black box. Hence, PESTO can be used for any parameter estimation problem, for which the user can provide a deterministic objective function in MATLAB. PESTO is a MATLAB toolbox, freely available under the BSD license. The source code, along with extensive documentation and example code, can be downloaded from https://github.com/ICB-DCM/PESTO/. jan.hasenauer@helmholtz-muenchen.de. Supplementary data are available at Bioinformatics online.
Medical subject headings
- Computational Biology
- Software