P-MartCancer-Interactive Online Software to Enable Analysis of Shotgun Cancer Proteomic Datasets.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 29092938.
- Also identified by DOI 10.1158/0008-5472.CAN-17-0335 and PMC identifier 5679244.
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Abstract
P-MartCancer is an interactive web-based software environment that enables statistical analyses of peptide or protein data, quantitated from mass spectrometry-based global proteomics experiments, without requiring in-depth knowledge of statistical programming. P-MartCancer offers a series of statistical modules associated with quality assessment, peptide and protein statistics, protein quantification, and exploratory data analyses driven by the user via customized workflows and interactive visualization. Currently, P-MartCancer offers access and the capability to analyze multiple cancer proteomic datasets generated through the Clinical Proteomics Tumor Analysis Consortium at the peptide, gene, and protein levels. P-MartCancer is deployed as a web service (https://pmart.labworks.org/cptac.html), alternatively available via Docker Hub (https://hub.docker.com/r/pnnl/pmart-web/). <i>Cancer Res; 77(21); e47-50. ©2017 AACR</i>.
Medical subject headings
- Internet
- Neoplasms
- Proteomics
- Software