SPV: a JavaScript Signaling Pathway Visualizer.
Where this comes from
- Record sourced from PubMed, PMID 29590303.
- Also identified by DOI 10.1093/bioinformatics/bty188 and PMC identifier 6061680.
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Abstract
The visualization of molecular interactions annotated in web resources is useful to offer to users such information in a clear intuitive layout. These interactions are frequently represented as binary interactions that are laid out in free space where, different entities, cellular compartments and interaction types are hardly distinguishable. Signaling Pathway Visualizer is a free open source JavaScript library, which offers a series of pre-defined elements, compartments and interaction types meant to facilitate the representation of signaling pathways consisting of causal interactions without neglecting simple protein-protein interaction networks. Freely available under Apache version 2 license; Source code: https://github.com/Sinnefa/SPV_Signaling_Pathway_Visualizer_v1.0. Language: JavaScript; Web technology: Scalable Vector Graphics; Libraries: D3.js.
Medical subject headings
- Computational Biology
- Protein Interaction Maps
- Signal Transduction
- Software