iS-CellR: a user-friendly tool for analyzing and visualizing single-cell RNA sequencing data.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 29982379.
- Also identified by DOI 10.1093/bioinformatics/bty517 and PMC identifier 6289135.
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Abstract
Interactive platform for single-cell RNA-sequencing (iS-CellR) is a web-based Shiny application that is designed to provide user-friendly, comprehensive analysis of single-cell RNA sequencing data. iS-CellR has the capability to run on any modern web browser and provides an accessible graphical user interface that enables the user to perform complex single-cell RNA-sequencing analysis without requiring programming skills. iS-CellR is open source and available through GitHub at https://github.com/immcore/iS-CellR. iS-CellR is implemented in Docker and can be launched on any operating system with Docker installed. Supplementary data are available at Bioinformatics online.
Medical subject headings
- Sequence Analysis, RNA
- Single-Cell Analysis
- Software