Squiggle: a user-friendly two-dimensional DNA sequence visualization tool.
other · Level V
Where this comes from
- Record sourced from PubMed, PMID 30247632.
- Also identified by DOI 10.1093/bioinformatics/bty807.
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Abstract
SUMMARY: Squiggle is a software tool that automatically generates interactive web-based two-dimensional graphical representations of raw DNA sequences. Built with ease of use in mind, Squiggle implements several prior sequence visualization algorithms and introduces novel visualization methods designed to maximize human usability. AVAILABILITY AND IMPLEMENTATION: Squiggle is written in Python 3 and freely available under the permissive MIT license. The open-source code can be downloaded from github.com/Lab41/squiggle as well as the Python Package Index. The installation instructions and user guide are available at squiggle.readthedocs.org.
Medical subject headings
- Algorithms
- Software