Binding and transport of D-aspartate by the glutamate transporter homolog Glt<sub>Tk</sub>.

Arkhipova, Valentina; Trinco, Gianluca; Ettema, Thijs W; Jensen, Sonja; Slotboom, Dirk J; Guskov, Albert · Elife · 2019

basic_science · Level V

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Abstract

Mammalian glutamate transporters are crucial players in neuronal communication as they perform neurotransmitter reuptake from the synaptic cleft. Besides L-glutamate and L-aspartate, they also recognize D-aspartate, which might participate in mammalian neurotransmission and/or neuromodulation. Much of the mechanistic insight in glutamate transport comes from studies of the archeal homologs Glt<sub>Ph</sub> from <i>Pyrococcus horikoshii</i> and Glt<sub>Tk</sub> from <i>Thermococcus kodakarensis</i>. Here, we show that Glt<sub>Tk</sub> transports D-aspartate with identical Na<sup>+</sup>: substrate coupling stoichiometry as L-aspartate, and that the affinities (<i>K<sub>d</sub></i> and <i>K<sub>m</sub></i>) for the two substrates are similar. We determined a crystal structure of Glt<sub>Tk</sub> with bound D-aspartate at 2.8 Å resolution. Comparison of the L- and D-aspartate bound Glt<sub>Tk</sub> structures revealed that D-aspartate is accommodated with only minor rearrangements in the structure of the binding site. The structure explains how the geometrically different molecules L- and D-aspartate are recognized and transported by the protein in the same way.

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