RCSB Protein Data Bank 1D tools and services.
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- Record sourced from PubMed, PMID 33313665.
- Also identified by DOI 10.1093/bioinformatics/btaa1012 and PMC identifier 8016458.
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Abstract
Interoperability between polymer sequences and structural data is essential for providing a complete picture of protein and gene features and helping to understand biomolecular function. Herein, we present two resources designed to improve interoperability between the RCSB Protein Data Bank, the NCBI and the UniProtKB data resources and visualize integrated data therefrom. The underlying tools provide a flexible means of mapping between the different coordinate spaces and an interactive tool allows convenient visualization of the 1-dimensional data over the web. https://1d-coordinates.rcsb.org and https://rcsb.github.io/rcsb-saguaro. Supplementary data are available at Bioinformatics online.