SNT: a unifying toolbox for quantification of neuronal anatomy.

Arshadi, Cameron; Günther, Ulrik; Eddison, Mark; Harrington, Kyle I S; Ferreira, Tiago A · Nat Methods · 2021

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Abstract

SNT is an end-to-end framework for neuronal morphometry and whole-brain connectomics that supports tracing, proof-editing, visualization, quantification and modeling of neuroanatomy. With an open architecture, a large user base, community-based documentation, support for complex imagery and several model organisms, SNT is a flexible resource for the broad neuroscience community. SNT is both a desktop application and multi-language scripting library, and it is available through the Fiji distribution of ImageJ.

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