Structural basis for gating mechanism of the human sodium-potassium pump.

Nguyen, Phong T; Deisl, Christine; Fine, Michael; Tippetts, Trevor S; Uchikawa, Emiko; Bai, Xiao-Chen; Levine, Beth · Nat Commun · 2022

basic_science · Level V

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Abstract

P2-type ATPase sodium-potassium pumps (Na<sup>+</sup>/K<sup>+</sup>-ATPases) are ion-transporting enzymes that use ATP to transport Na<sup>+</sup> and K<sup>+</sup> on opposite sides of the lipid bilayer against their electrochemical gradients to maintain ion concentration gradients across the membranes in all animal cells. Despite the available molecular architecture of the Na<sup>+</sup>/K<sup>+</sup>-ATPases, a complete molecular mechanism by which the Na<sup>+</sup> and K<sup>+</sup> ions access into and are released from the pump remains unknown. Here we report five cryo-electron microscopy (cryo-EM) structures of the human alpha3 Na<sup>+</sup>/K<sup>+</sup>-ATPase in its cytoplasmic side-open (E1), ATP-bound cytoplasmic side-open (E1•ATP), ADP-AlF<sub>4</sub><sup>-</sup> trapped Na<sup>+</sup>-occluded (E1•P-ADP), BeF<sub>3</sub><sup>-</sup> trapped exoplasmic side-open (E2P) and MgF<sub>4</sub><sup>2-</sup> trapped K<sup>+</sup>-occluded (E2•P<sub>i</sub>) states. Our work reveals the atomically resolved structural detail of the cytoplasmic gating mechanism of the Na<sup>+</sup>/K<sup>+</sup>-ATPase.

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