STRIKE-GOLDD 4.0: user-friendly, efficient analysis of structural identifiability and observability.
other · Level V
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- Record sourced from PubMed, PMID 36398887.
- Also identified by DOI 10.1093/bioinformatics/btac748 and PMC identifier 9805590.
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Abstract
STRIKE-GOLDD is a toolbox that analyses the structural identifiability and observability of possibly non-linear, non-rational ODE models that may have known and unknown inputs. Its broad applicability comes at the expense of a lower computational efficiency than other tools. STRIKE-GOLDD 4.0 includes a new algorithm, ProbObsTest, specifically designed for the analysis of rational models. ProbObsTest is significantly faster than the previously available FISPO algorithm when applied to computationally expensive models. Providing both algorithms in the same toolbox allows combining generality and computational efficiency. STRIKE-GOLDD 4.0 is implemented as a Matlab toolbox with a user-friendly graphical interface. STRIKE-GOLDD 4.0 is a free and open-source tool available under a GPLv3 license. It can be downloaded from GitHub at https://github.com/afvillaverde/strike-goldd. Supplementary data are available at Bioinformatics online.
Medical subject headings
- Software
- Algorithms