Conformational plasticity of NaK2K and TREK2 potassium channel selectivity filters.

Matamoros, Marcos; Ng, Xue Wen; Brettmann, Joshua B; Piston, David W; Nichols, Colin G · Nat Commun · 2023

basic_science · Level V

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Abstract

The K<sup>+</sup> channel selectivity filter (SF) is defined by TxGYG amino acid sequences that generate four identical K<sup>+</sup> binding sites (S1-S4). Only two sites (S3, S4) are present in the non-selective bacterial NaK channel, but a four-site K<sup>+</sup>-selective SF is obtained by mutating the wild-type TVGDGN SF sequence to a canonical K<sup>+</sup> channel TVGYGD sequence (NaK2K mutant). Using single molecule FRET (smFRET), we show that the SF of NaK2K, but not of non-selective NaK, is ion-dependent, with the constricted SF configuration stabilized in high K<sup>+</sup> conditions. Patch-clamp electrophysiology and non-canonical fluorescent amino acid incorporation show that NaK2K selectivity is reduced by crosslinking to limit SF conformational movement. Finally, the eukaryotic K<sup>+</sup> channel TREK2 SF exhibits essentially identical smFRET-reported ion-dependent conformations as in prokaryotic K<sup>+</sup> channels. Our results establish the generality of K<sup>+</sup>-induced SF conformational stability across the K<sup>+</sup> channel superfamily, and introduce an approach to study manipulation of channel selectivity.

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