DeepPheWAS: an R package for phenotype generation and association analysis for phenome-wide association studies.
other · Level V
Where this comes from
- Record sourced from PubMed, PMID 36744935.
- Also identified by DOI 10.1093/bioinformatics/btad073 and PMC identifier 10070035.
- Licence recorded as CC BY.
- The licence permits redistribution, so the abstract is shown in full and the full text is available from the publisher.
Abstract
DeepPheWAS is an R package for phenome-wide association studies that creates clinically curated composite phenotypes and integrates quantitative phenotypes from primary care data, longitudinal trajectories of quantitative measures, disease progression and drug response phenotypes. Tools are provided for efficient analysis of association with any genetic input, under any genetic model, with optional sex-stratified analysis, and for developing novel phenotypes. The DeepPheWAS R package is freely available under GNU general public licence v3.0 from at https://github.com/Richard-Packer/DeepPheWAS. Supplementary data are available at Bioinformatics online.
Medical subject headings
- Software
- Phenomics