Biocatalytic control of site-selectivity and chain length-selectivity in radical amino acid halogenases.

Kissman, Elijah N; Neugebauer, Monica E; Sumida, Kiera H; Swenson, Cameron V; Sambold, Nicholas A; Marchand, Jorge A; Millar, Douglas C; Chang, Michelle C Y · Proc Natl Acad Sci U S A · 2023

basic_science · Level V

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Abstract

Biocatalytic C-H activation has the potential to merge enzymatic and synthetic strategies for bond formation. Fe<sup>II</sup>/αKG-dependent halogenases are particularly distinguished for their ability both to control selective C-H activation as well as to direct group transfer of a bound anion along a reaction axis separate from oxygen rebound, enabling the development of new transformations. In this context, we elucidate the basis for the selectivity of enzymes that perform selective halogenation to yield 4-Cl-lysine (BesD), 5-Cl-lysine (HalB), and 4-Cl-ornithine (HalD), allowing us to probe how site-selectivity and chain length selectivity are achieved. We now report the crystal structure of the HalB and HalD, revealing the key role of the substrate-binding lid in positioning the substrate for C<sub>4</sub> vs C<sub>5</sub> chlorination and recognition of lysine vs ornithine. Targeted engineering of the substrate-binding lid further demonstrates that these selectivities can be altered or switched, showcasing the potential to develop halogenases for biocatalytic applications.

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