HiCube: interactive visualization of multiscale and multimodal Hi-C and 3D genome data.
Where this comes from
- Record sourced from PubMed, PMID 36961339.
- Also identified by DOI 10.1093/bioinformatics/btad154 and PMC identifier 10081873.
- Licence recorded as CC BY.
- The licence permits redistribution, so the abstract is shown in full and the full text is available from the publisher.
Abstract
HiCube is a lightweight web application for interactive visualization and exploration of diverse types of genomics data at multiscale resolutions. Especially, HiCube displays synchronized views of Hi-C contact maps and 3D genome structures with user-friendly annotation and configuration tools, thereby facilitating the study of 3D genome organization and function. HiCube is implemented in Javascript and can be installed via NPM. The source code is freely available at GitHub (https://github.com/wmalab/HiCube).
Medical subject headings
- Genome
- Genomics