A simple, time- and cost-effective, high-throughput depletion strategy for deep plasma proteomics.

Viode, Arthur; van Zalm, Patrick; Smolen, Kinga K; Fatou, Benoit; Stevenson, David; Jha, Meenakshi; Levy, Ofer; Steen, Judith et al. · Sci Adv · 2023

basic_science · Level V

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Abstract

We introduce a cost-effective, robust high-throughput-compatible plasma depletion method enabling in-depth profiling of plasma that detects >1300 proteins per run with a throughput of 60 samples per day. The method has been fully validated by processing >3000 samples with no apparent batch effect at a cost for the depletion step of ~$2.5 per sample.

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