selscan 2.0: scanning for sweeps in unphased data.
Where this comes from
- Record sourced from PubMed, PMID 38180866.
- Also identified by DOI 10.1093/bioinformatics/btae006 and PMC identifier 10789311.
- Licence recorded as CC BY.
- The licence permits redistribution, so the abstract is shown in full and the full text is available from the publisher.
Abstract
Several popular haplotype-based statistics for identifying recent or ongoing positive selection in genomes require knowledge of haplotype phase. Here, we provide an update to selscan which implements a re-definition of these statistics for use in unphased data. Source code and binaries are freely available at https://github.com/szpiech/selscan, implemented in C/C++, and supported on Linux, Windows, and MacOS.
Medical subject headings
- Software
- Genome