Substrate-induced condensation activates plant TIR domain proteins.

Song, Wen; Liu, Li; Yu, Dongli; Bernardy, Hanna; Jirschitzka, Jan; Huang, Shijia; Jia, Aolin; Jemielniak, Wictoria et al. · Nature · 2024

basic_science · Level V

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Abstract

Plant nucleotide-binding leucine-rich repeat (NLR) immune receptors with an N-terminal Toll/interleukin-1 receptor (TIR) domain mediate recognition of strain-specific pathogen effectors, typically via their C-terminal ligand-sensing domains<sup>1</sup>. Effector binding enables TIR-encoded enzymatic activities that are required for TIR-NLR (TNL)-mediated immunity<sup>2,3</sup>. Many truncated TNL proteins lack effector-sensing domains but retain similar enzymatic and immune activities<sup>4,5</sup>. The mechanism underlying the activation of these TIR domain proteins remain unclear. Here we show that binding of the TIR substrates NAD<sup>+</sup> and ATP induces phase separation of TIR domain proteins in vitro. A similar condensation occurs with a TIR domain protein expressed via its native promoter in response to pathogen inoculation in planta. The formation of TIR condensates is mediated by conserved self-association interfaces and a predicted intrinsically disordered loop region of TIRs. Mutations that disrupt TIR condensates impair the cell death activity of TIR domain proteins. Our data reveal phase separation as a mechanism for the activation of TIR domain proteins and provide insight into substrate-induced autonomous activation of TIR signalling to confer plant immunity.

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