Leveraging multi-omics data to empower quantitative systems pharmacology in immuno-oncology.

Arulraj, Theinmozhi; Wang, Hanwen; Ippolito, Alberto; Zhang, Shuming; Fertig, Elana J; Popel, Aleksander S · Brief Bioinform · 2024

basic_science · Level V

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Abstract

Understanding the intricate interactions of cancer cells with the tumor microenvironment (TME) is a pre-requisite for the optimization of immunotherapy. Mechanistic models such as quantitative systems pharmacology (QSP) provide insights into the TME dynamics and predict the efficacy of immunotherapy in virtual patient populations/digital twins but require vast amounts of multimodal data for parameterization. Large-scale datasets characterizing the TME are available due to recent advances in bioinformatics for multi-omics data. Here, we discuss the perspectives of leveraging omics-derived bioinformatics estimates to inform QSP models and circumvent the challenges of model calibration and validation in immuno-oncology.

Medical subject headings