Closing Kok's cycle of nature's water oxidation catalysis.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 39013902.
- Also identified by DOI 10.1038/s41467-024-50210-6 and PMC identifier 11252165.
- Licence recorded as CC BY.
- The licence permits redistribution, so the abstract is shown in full and the full text is available from the publisher.
Abstract
The Mn<sub>4</sub>CaO<sub>5(6)</sub> cluster in photosystem II catalyzes water splitting through the S<sub>i</sub> state cycle (i = 0-4). Molecular O<sub>2</sub> is formed and the natural catalyst is reset during the final S<sub>3</sub> → (S<sub>4</sub>) → S<sub>0</sub> transition. Only recently experimental breakthroughs have emerged for this transition but without explicit information on the S<sub>0</sub>-state reconstitution, thus the progression after O<sub>2</sub> release remains elusive. In this report, our molecular dynamics simulations combined with density functional calculations suggest a likely missing link for closing the cycle, i.e., restoring the first catalytic state. Specifically, the formation of closed-cubane intermediates with all hexa-coordinate Mn is observed, which would undergo proton release, water dissociation, and ligand transfer to produce the open-cubane structure of the S<sub>0</sub> state. Thereby, we theoretically identify the previously unknown structural isomerism in the S<sub>0</sub> state that acts as the origin of the proposed structural flexibility prevailing in the cycle, which may be functionally important for nature's water oxidation catalysis.