A semi-supervised fracture-attention model for segmenting tubular objects with improved topological connectivity.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 39799504.
- Also identified by DOI 10.1093/bioinformatics/btaf013 and PMC identifier 11783301.
- Licence recorded as CC BY.
- The licence permits redistribution, so the abstract is shown in full and the full text is available from the publisher.
Abstract
Ensuring connectivity and preventing fractures in tubular object segmentation are critical for downstream analyses. Despite advancements in deep neural networks that have significantly improved tubular object segmentation, existing methods still face limitations. They often rely heavily on precise annotations, hindering their scalability to large-scale unlabeled image datasets. Additionally, current evaluation metrics are insufficient for effectively capturing segmentation fractures. To address these challenges, we propose a semi-supervised fracture-attention model (SSFA) for tubular object segmentation. SSFA enhances connectivity, reduces fractures, and maintains volumetric accuracy. It outperforms state-of-the-art models in topological performance. Extensive experiments on four public datasets validate the effectiveness of SSFA. Furthermore, we introduce a novel evaluation metric, the fracture rate, which provides an intuitive and quantitative assessment of segmentation fractures. Our source code is available at http://github.com/Yanfeng-Zhou/SSFA.
Medical subject headings
- Image Processing, Computer-Assisted