Ratio-based indicators for cytosolic Ca<sup>2+</sup> with visible light excitation.

Zhou, Xinqi; Belavek, Kayla J; Navarro, Marisol X; Martinez, Kayli N; Hinojosa, Abigail; Miller, Evan W · Proc Natl Acad Sci U S A · 2025

basic_science · Level V

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Abstract

Calcium ions (Ca<sup>2+</sup>) play central roles in cellular physiology. Fluorescent indicators for Ca<sup>2+</sup> ions revolutionized our ability to make rapid, accurate, and highly parallel measurement of Ca<sup>2+</sup> concentrations in living cells. The use of ratio-based imaging with one particular indicator, fura-2, allowed practitioners to correct for a number of experimental confounds, including dye bleaching, variations in sample thickness, and fluctuations in illumination intensity. Ratio-based imaging with fura-2 was the most accurate and reliable method for measuring Ca<sup>2+</sup> concentrations. Two drawbacks to fura-2 exist. First, it requires ultraviolet (UV) excitation, which is more toxic to living cells than visible light. Second, our ability to use fura-2 for accurate, stable, ratio-based determinations of Ca<sup>2+</sup> concentration in living cells is fast becoming a method of the past. This is due, in part, because modern microscopes are phasing out the use of mercury arc lamps that provide the UV excitation needed for fura-2 imaging. To address this problem, we describe the design, synthesis, and cellular application of benzo[<i>b</i>]phosphole-based fluorescent Ca<sup>2+</sup> indicators for ratio-based imaging of Ca<sup>2+</sup> in living cells that can be used with modern light emitting diode (LED)-equipped fluorescence microscopes. We report isoCaRed-1Me, a Ca<sup>2+</sup> indicator that enables ratio-based imaging in immortalized cell lines, primary mammalian hippocampal neurons, and human-induced pluripotent stem cell-derived cardiomyocytes. These data show that isoCaRed-1Me will be useful for ratio-based Ca<sup>2+</sup> imaging using modern microscopes.

Medical subject headings