Transfer RNA acetylation regulates in vivo mammalian stress signaling.

Thalalla Gamage, Supuni; Khoogar, Roxane; Howpay Manage, Shereen; DaRos, Judey T; Crawford, McKenna C; Georgeson, Joe; Polevoda, Bogdan V; Sanders, Chelsea et al. · Sci Adv · 2025

basic_science · Level V

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Abstract

Transfer RNA (tRNA) modifications are crucial for protein synthesis, but their position-specific physiological roles remain poorly understood. Here, we investigate the impact of <i>N</i><sup>4</sup>-acetylcytidine (ac<sup>4</sup>C), a highly conserved tRNA modification catalyzed by the essential acetyltransferase Nat10. By targeting Thumpd1, a nonessential adapter protein required for Nat10-catalyzed tRNA acetylation, we determine that loss of tRNA acetylation leads to reduced levels of tRNA<sup>Leu</sup>, increased ribosome stalling, and activation of eIF2α phosphorylation. Thumpd1 knockout mice exhibit growth defects and sterility. Concurrent knockout of Thumpd1 and the stress-sensing kinase Gcn2 causes penetrant postnatal lethality in mice, indicating a critical genetic interaction. Our findings demonstrate that a modification restricted to a single position within type II cytosolic tRNAs can regulate ribosome-mediated stress signaling in mammalian organisms, with implications for our understanding of translational control and therapeutic interventions.

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