Regulated somatic hypermutation enhances antibody affinity maturation.

Merkenschlager, Julia; Pyo, Andrew G T; Silva Santos, Gabriela S; Schaefer-Babajew, Dennis; Cipolla, Melissa; Hartweger, Harald; Gitlin, Alexander D; Wingreen, Ned S et al. · Nature · 2025

basic_science · Level V

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Abstract

Germinal centres are specialized microenvironments where B cells undergo affinity maturation. B cells expressing antibodies whose affinity is improved by somatic hypermutation are selected for expansion by limiting numbers of T follicular helper cells. Cell division is accompanied by mutation of the immunoglobulin genes, at what is believed to be a fixed rate of around 1 × 10<sup>-3</sup> per base pair per cell division<sup>1</sup>. As mutagenesis is random, the probability of acquiring deleterious mutations outweighs the probability of acquiring affinity-enhancing mutations. This effect might be heightened, and even become counterproductive, in B cells that express high-affinity antibodies and undergo the greatest number of cell divisions<sup>2</sup>. Here we experimentally examine a theoretical model that explains how affinity maturation could be optimized by varying the rate of somatic hypermutation such that cells that express higher-affinity antibodies divide more but mutate less per division. Data obtained from mice immunized with SARS-CoV-2 vaccines or a model antigen align with the theoretical model and show that cells producing high-affinity antibodies shorten the G0/G1 phases of the cell cycle and reduce their mutation rates. We propose that these mechanisms safeguard high-affinity B cell lineages and enhance the outcomes of antibody affinity maturation.

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