Extending atomic decomposition and many-body representation with a chemistry-motivated approach to machine learning potentials.

Yu, Qi; Ma, Ruitao; Qu, Chen; Conte, Riccardo; Nandi, Apurba; Pandey, Priyanka; Houston, Paul L; Zhang, Dong H et al. · Nat Comput Sci · 2025

basic_science · Level V

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Abstract

Most widely used machine learning potentials for condensed-phase applications rely on many-body permutationally invariant polynomial or atom-centered neural networks. However, these approaches face challenges in achieving chemical interpretability in atomistic energy decomposition and fully matching the computational efficiency of traditional force fields. Here we present a method that combines aspects of both approaches and balances accuracy and force-field-level speed. This method utilizes a monomer-centered representation, where the potential energy is decomposed into the sum of chemically meaningful monomeric energies. The structural descriptors of monomers are described by one-body and two-body effective interactions, enforced by appropriate sets of permutationally invariant polynomials as inputs to the feed-forward neural networks. Systematic assessments of models for gas-phase water trimer, liquid water, methane-water cluster and liquid carbon dioxide are performed. The improved accuracy, efficiency and flexibility of this method have promise for constructing accurate machine learning potentials and enabling large-scale quantum and classical simulations for complex molecular systems.