Gut inflammation promotes microbiota-specific CD4 T cell-mediated neuroinflammation.

White, Zachary; Cabrera, Ivan; Mei, Linghan; Clevenger, Margarette; Ochoa-Raya, Andrea; Kapustka, Isabel; Dominguez, Joseph R; Zhou, Jinyan et al. · Nature · 2025

basic_science · Level V

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Abstract

The microbiota has been recognized as a critical contributor to various diseases<sup>1</sup>, with multiple reports of changes in the composition of the gut microbiome in contexts such as inflammatory bowel disease<sup>2,3</sup> and neurodegenerative diseases<sup>4</sup>. These microbial shifts can exert systemic effects by altering the release of specific metabolites into the bloodstream<sup>5,6</sup>, and the gastrointestinal microbiota has also been reported to exhibit immunomodulatory activity through the activation of innate and adaptive immunity<sup>7,8</sup>. However, it remains unclear how the microbiota contributes to inflammation in the central nervous system (CNS), where these microorganisms are typically absent. Here we report that T cells that recognize gut-colonizing segmented filamentous bacteria can induce inflammation in the mouse intestine and CNS in the absence of functional regulatory T cells. Gut commensal-specific CD4 T cells (T<sub>comm</sub> cells) that are dysregulated in the inflamed gut can become licensed to infiltrate into the CNS regardless of their antigen specificity and have the potential to be re-stimulated by host protein-derived antigens in the CNS via molecular mimicry, whereupon they produce high levels of GM-CSF, IFNγ and IL-17A, triggering neurological damage. These infiltrated T<sub>comm</sub> cells initiate CNS inflammation by activating microglia through their IL-23R-dependent encephalitogenic programme and their IL-23R-independent GM-CSF production. Together, our findings reveal potential mechanisms whereby perturbation of T<sub>comm</sub> cells can contribute to extraintestinal inflammation.

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