Engineering of ATP synthase for enhancement of proton-to-ATP ratio.

Ueno, Hiroshi; Yasuda, Kiyoto; Hamaguchi-Suzuki, Norie; Marui, Riku; Adachi, Naruhiko; Senda, Toshiya; Murata, Takeshi; Noji, Hiroyuki · Nat Commun · 2025

basic_science · Level V

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Abstract

F<sub>o</sub>F<sub>1</sub>-ATP synthase (F<sub>o</sub>F<sub>1</sub>) interconverts the energy of the proton motive force (pmf) and that of ATP through the mechanical rotation. The H<sup>+</sup>/ATP ratio, one of the most crucial parameters in bioenergetics, varies among species due to differences in the number of H<sup>+</sup>-binding c-subunits, resulting in H<sup>+</sup>/ATP ratios ranging from 2.7 to 5. In this study, we seek to significantly enhance the H<sup>+</sup>/ATP ratio by employing an alternative approach that differs from that of nature. We engineer F<sub>o</sub>F<sub>1</sub> to form multiple peripheral stalks, each bound to a proton-conducting a-subunit. The engineered F<sub>o</sub>F<sub>1</sub> exhibits an H<sup>+</sup>/ATP ratio of 5.8, surpassing the highest ratios found in naturally occurring F<sub>o</sub>F<sub>1</sub>s, enabling ATP synthesis under low pmf conditions where wild-type enzymes cannot synthesize ATP. Structural analysis reveals that the engineered F<sub>o</sub>F<sub>1</sub> forms up to three peripheral stalks and a-subunits. This study not only provides valuable insights into the H<sup>+</sup>-transport mechanism of F<sub>o</sub>F<sub>1</sub> but also opens up possibilities for engineering the foundation of cellular bioenergetics.

Medical subject headings