Molecular basis of ligand binding and receptor activation at the human A<sub>3</sub> adenosine receptor.

Zhang, Liudi; Mobbs, Jesse I; Bennetts, Felix M; Venugopal, Hariprasad; Nguyen, Anh T N; Christopoulos, Arthur; van der Es, Daan; Heitman, Laura H et al. · Nat Commun · 2025

basic_science · Level V

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Abstract

Adenosine receptors (ARs: A<sub>1</sub>AR, A<sub>2A</sub>AR, A<sub>2B</sub>AR, and A<sub>3</sub>AR) are crucial therapeutic targets; however, developing selective, efficacious drugs for them remains a significant challenge. Here, we present high-resolution cryo-electron microscopy (cryo-EM) structures of the human A<sub>3</sub>AR in three distinct functional states: bound to the endogenous agonist adenosine, the clinically relevant agonist Piclidenoson, and the covalent antagonist LUF7602. These structures, complemented by mutagenesis and pharmacological studies, reveal an A<sub>3</sub>AR activation mechanism that involves an extensive hydrogen bond network from the extracellular surface down to the orthosteric binding site. In addition, we identify a cryptic pocket that accommodates the N<sup>6</sup>-iodobenzyl group of Piclidenoson through a ligand-dependent conformational change of M174<sup>5.35</sup>. Our comprehensive structural and functional characterisation of A<sub>3</sub>AR advances our understanding of adenosine receptor pharmacology and establishes a foundation for developing more selective therapeutics for various disorders, including inflammatory diseases, cancer, and glaucoma.

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