Selective methylene oxidation in α,β-unsaturated carbonyl natural products.

Ahn, Chiyoung; Gomez, Alexander; Hartmann, Marc A; White, M Christina · Nature · 2025

basic_science · Level V

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Abstract

α,β-Unsaturated carbonyl groups-which feature conjugated C=C and C=O bonds-are common in bioactive compounds. Late-stage functionalization of these compounds could involve oxidation of methylene (2°) C-H bonds while leaving the C=C double bonds that are important for biological activity intact<sup>1-3</sup>. Although catalytic systems have been developed for selective oxidation of methylenes in the presence of aromatics<sup>4</sup> and N-heterocycles<sup>5</sup>, olefins remain a long-standing challenge. Here we show that replacing the carboxylic acid with a hydrogen bond donor solvent in sterically hindered manganese PDP ([N,N'-bis(2-pyridylmethyl)]-2,2'-bipyrrolidine) catalysts changes the active oxidant to one that accelerates electron-rich methylene oxidation and significantly slows epoxidation of electron-deficient olefins (k<sub>C</sub><sub>-H[O]</sub>/k<sub>epox</sub> = 38.5). Chemoselective methylene oxidation is demonstrated in forty-five molecules housing α,β-unsaturated carbonyl functionality, where all previous methods afforded allylic oxidation or epoxidation. Mechanistic studies support that the new oxidant operates via a more charged pathway that disfavours electron-deficient bonds, demonstrating that highly reactive metal oxidants can be tuned to achieve chemoselectivity. These findings enable the first late-stage oxidations in complex natural products and derivatives containing these pharmacophoric substructures, providing access to both new analogues and known metabolites.

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