Multistep receptor binding of the hepatitis B virus preS1 domain.

Kobayashi, Chisa; Ekimoto, Toru; Ooka, Koji; Mifune, Junki; Matsuzawa, Kayo; Que, Lusheng; Li, Yingfang; Kusunoki, Atsuto et al. · Nat Commun · 2026

basic_science · Level V

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Abstract

The preS1 domain present on hepatitis B and D virus particles is an intrinsically disordered peptide (IDP) essential for recognizing the host receptor, sodium taurocholate co-transporting polypeptide (NTCP). However, it remains poorly understood how the disordered preS1 peptide achieves high-affinity binding through its conformational change. Here, we reveal a stepwise binding process through which multiple regions within preS1 cooperate to establish the stable binding to NTCP. By combining structure-based molecular simulations with virological assays, we show that Asn9<sup>preS1</sup>, Gly12<sup>preS1</sup>, and His17<sup>preS1</sup> primarily mediate the NTCP binding by forming a tandem loop core structure that docks into the bile acid tunnel of NTCP, creating an extensive binding interface. Another interaction via Trp41<sup>preS1</sup> stabilizes the flexible preS1 33-48 aa stretch embedded onto the NTCP outerface, particularly involving Asn87<sup>NTCP</sup> and Tyr146<sup>NTCP</sup>. Mutation in these key residues abolishes virion infectivity in cell culture and mouse models, demonstrating the biological significance of this binding maturation. These findings propose a multistep mechanism for viral IDP-mediated receptor recognition that ensures high virion infectivity and strict host specificity.

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