Response to: "best practices when benchmarking CATCH for the design of genome enrichment probes".
editorial · Level V
Where this comes from
- Record sourced from PubMed, PMID 41776823.
- Also identified by DOI 10.1093/bioinformatics/btag100 and PMC identifier 12996868.
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Abstract
We clarify the design principles and evaluation choices underlying Syotti, a robust and scalable probe-design tool developed to support large, heterogeneous bacterial datasets with minimal parameter tuning. We highlight Syotti's ability to perform simultaneous large-scale designs and its effectiveness as a reliable alternative when existing tools such as CATCH are not well suited to the problem setting.
Medical subject headings
- Software
- Genome, Bacterial